Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm12321-201ENSMUST00000121485 804 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm24057-201ENSMUST00000158616 302 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm6047-201ENSMUST00000167221 574 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm4308-201ENSMUST00000179735 914 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm43656-201ENSMUST00000197882 434 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm44943-201ENSMUST00000207254 300 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm18871-201ENSMUST00000218655 745 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm32899-201ENSMUST00000219694 207 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.64□□□□□ -1.03
Brf1Q8CFK2 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm5656-201ENSMUST00000171020 1096 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Pea15b-201ENSMUST00000182806 387 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm18699-201ENSMUST00000190713 243 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm5154-201ENSMUST00000203971 399 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm8921-201ENSMUST00000204306 649 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm44971-201ENSMUST00000206192 337 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm44722-201ENSMUST00000206473 436 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm8804-201ENSMUST00000212292 798 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm17611-202ENSMUST00000220613 814 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 AC131710.2-201ENSMUST00000226773 683 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm9800-201ENSMUST00000052615 336 ntBASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Brf1Q8CFK2 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm22671-201ENSMUST00000104420 134 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm15586-201ENSMUST00000121218 528 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm15538-201ENSMUST00000121410 313 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm12754-201ENSMUST00000121908 454 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm26480-201ENSMUST00000122619 297 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm25505-201ENSMUST00000157220 246 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms