Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 AC111010.1-203ENSMUST00000227287 1548 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 AC162301.1-201ENSMUST00000228785 1542 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm42811-201ENSMUST00000201951 2768 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm23739-201ENSMUST00000102295 108 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Mir1192-201ENSMUST00000116976 121 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm11256-201ENSMUST00000118109 829 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm12901-201ENSMUST00000118690 532 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gm45693-201ENSMUST00000211391 1157 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 AC134439.1-201ENSMUST00000220923 600 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 AC154245.1-201ENSMUST00000224615 601 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 n-R5s36-201ENSMUST00000082998 119 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Lrrc8d-202ENSMUST00000120847 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Pabpn1Q8CCS6 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Rhbdd1-201ENSMUST00000027322 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm45174-201ENSMUST00000208884 3065 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm13400-201ENSMUST00000117436 380 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm15078-201ENSMUST00000118371 782 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm14603-201ENSMUST00000121275 448 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm15959-201ENSMUST00000121724 368 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm23250-201ENSMUST00000157444 267 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm22764-201ENSMUST00000158370 92 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gm18467-201ENSMUST00000208805 434 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 AC140930.1-201ENSMUST00000221889 389 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Mir298-201ENSMUST00000083476 82 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 AC158388.2-201ENSMUST00000223665 1314 ntBASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pabpn1Q8CCS6 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Gm15225-201ENSMUST00000120449 1017 ntBASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pabpn1Q8CCS6 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms