Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Mir697-201ENSMUST00000102316 109 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm8421-201ENSMUST00000119439 305 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm7244-201ENSMUST00000164658 455 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Mir7011-201ENSMUST00000183768 73 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm38373-201ENSMUST00000192042 288 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm15105-201ENSMUST00000117777 204 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm25180-201ENSMUST00000157746 115 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm23276-201ENSMUST00000157913 138 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm19840-201ENSMUST00000169624 882 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm26179-201ENSMUST00000177723 132 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm27617-201ENSMUST00000184321 168 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atg4aQ8C9S8 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms