Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm14727-201ENSMUST00000118526 525 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm14721-201ENSMUST00000121381 525 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm8524-201ENSMUST00000186232 379 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm5575-201ENSMUST00000190879 398 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm20690-202ENSMUST00000195126 355 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm44931-201ENSMUST00000206056 545 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm18503-201ENSMUST00000220340 728 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm14279-201ENSMUST00000117142 332 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm10243-201ENSMUST00000117571 333 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm12459-201ENSMUST00000120659 356 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm15188-201ENSMUST00000121264 704 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm12321-201ENSMUST00000121485 804 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm26480-201ENSMUST00000122619 297 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm22342-201ENSMUST00000122647 298 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm23222-201ENSMUST00000158117 76 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm24057-201ENSMUST00000158616 302 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm18595-201ENSMUST00000175736 1068 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm18752-201ENSMUST00000192876 608 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm43926-201ENSMUST00000203978 430 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm44258-201ENSMUST00000204925 301 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm44971-201ENSMUST00000206192 337 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Diaph3-204ENSMUST00000226254 682 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm10247-201ENSMUST00000090395 333 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.88□□□□□ -1.15
Trim9Q8C7M3 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim9Q8C7M3 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim9Q8C7M3 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim9Q8C7M3 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim9Q8C7M3 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Trim9Q8C7M3 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trim9Q8C7M3 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim9Q8C7M3 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms