Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col16a1Q8BLX7 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Col16a1Q8BLX7 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col16a1Q8BLX7 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col16a1Q8BLX7 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Col16a1Q8BLX7 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col16a1Q8BLX7 Gm44104-201ENSMUST00000204736 3777 ntBASIC9.35□□□□□ -0.91
Col16a1Q8BLX7 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Gm14893-201ENSMUST00000117904 282 ntBASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Gm4853-201ENSMUST00000119359 394 ntBASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Gm24687-201ENSMUST00000157758 241 ntBASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Gm8637-201ENSMUST00000212919 1085 ntBASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 AC158605.4-201ENSMUST00000219013 3361 ntBASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Gm37289-201ENSMUST00000195409 1402 ntBASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col16a1Q8BLX7 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Col16a1Q8BLX7 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm4992-201ENSMUST00000120256 768 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm28527-201ENSMUST00000185210 297 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm34768-201ENSMUST00000193884 565 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm30708-201ENSMUST00000202183 312 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 AC162301.1-201ENSMUST00000228785 1542 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 AC165260.6-206ENSMUST00000223884 3698 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm17841-201ENSMUST00000210711 2425 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Dalir-201ENSMUST00000188773 2170 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm5793-201ENSMUST00000119393 630 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm22530-201ENSMUST00000158820 118 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm27295-201ENSMUST00000184264 153 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm43689-201ENSMUST00000195951 427 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Gm4083-201ENSMUST00000207158 451 ntBASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col16a1Q8BLX7 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms