Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm17038-201ENSMUST00000166586 494 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm27715-201ENSMUST00000184714 260 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm29357-201ENSMUST00000186877 698 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm43461-201ENSMUST00000202351 996 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm43812-202ENSMUST00000202701 581 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm4574-201ENSMUST00000207804 542 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm4536-201ENSMUST00000209157 542 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm18860-201ENSMUST00000212029 764 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 AC132237.2-201ENSMUST00000221702 1209 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Anxa13-202ENSMUST00000227274 1201 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 AC122877.1-201ENSMUST00000228873 218 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm6418-201ENSMUST00000118325 3577 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Prpf38bQ80SY5 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm5316-202ENSMUST00000185734 3096 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 AC160637.1-201ENSMUST00000214037 3887 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm28229-201ENSMUST00000188747 2153 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm26377-201ENSMUST00000102184 108 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm12287-201ENSMUST00000119770 707 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm14900-201ENSMUST00000120304 733 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm23657-201ENSMUST00000122623 294 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm22025-201ENSMUST00000122734 302 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm6921-201ENSMUST00000161478 435 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm8540-201ENSMUST00000168952 732 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm22392-201ENSMUST00000177971 107 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm27001-201ENSMUST00000182252 936 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm43711-201ENSMUST00000195994 373 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm43004-201ENSMUST00000201872 703 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm33096-201ENSMUST00000210189 493 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm45283-201ENSMUST00000210593 628 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm5173-201ENSMUST00000219616 950 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm8153-201ENSMUST00000219844 952 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 CT030646.1-201ENSMUST00000225049 980 ntBASIC8.38□□□□□ -1.07
Prpf38bQ80SY5 Gm5087-204ENSMUST00000225820 645 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 283.3 ms