Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Shank3Q4ACU6 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Shank3Q4ACU6 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm18716-201ENSMUST00000204507 1603 ntBASIC8.81□□□□□ -1
Shank3Q4ACU6 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.81□□□□□ -1
Shank3Q4ACU6 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC8.81□□□□□ -1
Shank3Q4ACU6 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.81□□□□□ -1
Shank3Q4ACU6 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.81□□□□□ -1
Shank3Q4ACU6 Gm25722-201ENSMUST00000157498 279 ntBASIC8.81□□□□□ -1
Shank3Q4ACU6 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Shank3Q4ACU6 Gm21301-201ENSMUST00000189476 699 ntBASIC8.81□□□□□ -1
Shank3Q4ACU6 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Shank3Q4ACU6 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.81□□□□□ -1
Shank3Q4ACU6 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Shank3Q4ACU6 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.81□□□□□ -1
Shank3Q4ACU6 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.81□□□□□ -1
Shank3Q4ACU6 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC8.81□□□□□ -1
Shank3Q4ACU6 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.81□□□□□ -1
Shank3Q4ACU6 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm13352-201ENSMUST00000117515 262 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm9428-201ENSMUST00000127214 769 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC8.8□□□□□ -1
Shank3Q4ACU6 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm9535-201ENSMUST00000218499 768 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm19195-201ENSMUST00000222018 511 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC8.8□□□□□ -1
Shank3Q4ACU6 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Nmnat2-201ENSMUST00000043313 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm13224-201ENSMUST00000119586 94 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm20620-201ENSMUST00000177528 168 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm17048-201ENSMUST00000179266 847 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm5694-201ENSMUST00000195648 641 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm43555-201ENSMUST00000196588 310 ntBASIC8.8□□□□□ -1
Shank3Q4ACU6 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.8□□□□□ -1
Shank3Q4ACU6 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Shank3Q4ACU6 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Shank3Q4ACU6 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Shank3Q4ACU6 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms