Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm9597-202ENSMUST00000227632 1387 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm11443-201ENSMUST00000118790 479 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm9378-201ENSMUST00000120315 471 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm9208-201ENSMUST00000120468 948 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm13754-201ENSMUST00000120486 998 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm37866-201ENSMUST00000191950 696 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm37585-201ENSMUST00000195440 280 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm42796-201ENSMUST00000199913 1087 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 AC162176.1-201ENSMUST00000216490 618 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 AC153516.1-201ENSMUST00000217955 779 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 AC173482.2-201ENSMUST00000224044 750 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 AC125464.1-201ENSMUST00000228013 512 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 CT009515.1-201ENSMUST00000228127 586 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm9408-201ENSMUST00000197375 1505 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.12□□□□□ -1.11
Cntn3Q07409 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.12□□□□□ -1.11
Cntn3Q07409 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cntn3Q07409 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cntn3Q07409 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cntn3Q07409 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cntn3Q07409 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm15057-201ENSMUST00000121516 534 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm14053-201ENSMUST00000121662 470 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC8.11□□□□□ -1.11
Cntn3Q07409 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Cntn3Q07409 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms