Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm28864-201ENSMUST00000189251 644 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm37191-201ENSMUST00000193346 388 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.64□□□□□ -1.35
Col8a1Q00780 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm42926-201ENSMUST00000200496 697 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm7554-201ENSMUST00000202282 574 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm44178-201ENSMUST00000205229 2930 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm13108-201ENSMUST00000122287 1455 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col8a1Q00780 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC6.63□□□□□ -1.35
Col8a1Q00780 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm13414-201ENSMUST00000117516 727 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm14248-201ENSMUST00000117790 544 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm15030-201ENSMUST00000119804 484 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm20452-201ENSMUST00000174686 513 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col8a1Q00780 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Col8a1Q00780 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm37439-201ENSMUST00000193150 856 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm31306-201ENSMUST00000197517 508 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm39121-201ENSMUST00000208847 525 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm45299-201ENSMUST00000210199 420 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm45725-201ENSMUST00000212962 337 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm29807-201ENSMUST00000220161 372 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 AC159379.2-201ENSMUST00000220244 2482 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 AC151982.1-201ENSMUST00000223546 464 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 AC117656.3-203ENSMUST00000225007 1809 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Col8a1Q00780 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 AC107452.2-201ENSMUST00000228415 363 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.63□□□□□ -1.35
Col8a1Q00780 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col8a1Q00780 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col8a1Q00780 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms