Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm43815-201ENSMUST00000197676 990 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm4290-201ENSMUST00000206897 814 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm33096-201ENSMUST00000210189 493 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 AC125190.2-201ENSMUST00000221160 497 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm37079-201ENSMUST00000194114 2135 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm28320-201ENSMUST00000187777 2273 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm41-201ENSMUST00000116183 1023 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm13325-201ENSMUST00000118746 806 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm25266-201ENSMUST00000158521 304 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC8.29□□□□□ -1.08
Hmgb1P63158 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm42489-201ENSMUST00000198964 669 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm4898-201ENSMUST00000218519 832 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Olfr1255-201ENSMUST00000057369 933 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.29□□□□□ -1.08
Hmgb1P63158 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb1P63158 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb1P63158 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmgb1P63158 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Mir711-201ENSMUST00000102188 82 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm16221-201ENSMUST00000117331 393 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm9429-201ENSMUST00000117804 868 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm15836-201ENSMUST00000119952 793 ntBASIC8.28□□□□□ -1.08
Hmgb1P63158 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Hmgb1P63158 Gm11895-201ENSMUST00000122165 467 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms