Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm23323-201ENSMUST00000104471 133 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm15665-201ENSMUST00000119116 847 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm14202-201ENSMUST00000120121 311 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm12642-201ENSMUST00000121098 876 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm14053-201ENSMUST00000121662 470 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm5611-201ENSMUST00000164523 852 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm8046-201ENSMUST00000172151 616 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm3611-201ENSMUST00000173687 877 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm29195-201ENSMUST00000189038 379 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm9723-201ENSMUST00000192100 457 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm6197-201ENSMUST00000192273 454 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm17965-201ENSMUST00000193904 517 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Gm37349-201ENSMUST00000194205 624 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.49□□□□□ -1.37
Rfx3P48381 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.49□□□□□ -1.37
Rfx3P48381 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.49□□□□□ -1.37
Rfx3P48381 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rfx3P48381 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Rfx3P48381 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.49□□□□□ -1.37
Rfx3P48381 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx3P48381 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx3P48381 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx3P48381 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rfx3P48381 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rfx3P48381 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm13137-201ENSMUST00000118035 345 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm12710-201ENSMUST00000119011 216 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm5255-201ENSMUST00000120125 642 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm10157-201ENSMUST00000139408 343 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm22795-201ENSMUST00000157233 118 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm24883-201ENSMUST00000158391 281 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm24738-201ENSMUST00000158856 123 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC6.48□□□□□ -1.37
Rfx3P48381 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm21182-201ENSMUST00000178899 794 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm28341-201ENSMUST00000190883 472 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm35108-201ENSMUST00000194321 699 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm33191-201ENSMUST00000195604 699 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm43558-201ENSMUST00000200155 210 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.48□□□□□ -1.37
Rfx3P48381 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.48□□□□□ -1.37
Rfx3P48381 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx3P48381 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm5250-201ENSMUST00000059065 321 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx3P48381 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.48□□□□□ -1.37
Rfx3P48381 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rfx3P48381 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms