Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm43019-201ENSMUST00000196948 2863 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm18422-202ENSMUST00000203798 2214 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm24335-201ENSMUST00000104211 132 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm15090-201ENSMUST00000118787 1196 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm12383-201ENSMUST00000120628 760 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm11474-201ENSMUST00000120814 277 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm11910-201ENSMUST00000121624 432 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm15089-201ENSMUST00000122332 1196 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm15795-201ENSMUST00000160969 553 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm17075-201ENSMUST00000171924 670 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm9286-201ENSMUST00000173586 508 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm18415-201ENSMUST00000177464 647 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm28428-201ENSMUST00000188886 697 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC9.03□□□□□ -0.96
Rfx1P48377 Trav12-4-201ENSMUST00000200663 271 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm45608-201ENSMUST00000210948 389 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 AC154250.1-201ENSMUST00000224775 489 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Rfx1P48377 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm43429-201ENSMUST00000197889 2251 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm37080-201ENSMUST00000194804 2404 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Rfx1P48377 Gm5903-201ENSMUST00000121836 2325 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Gm18957-201ENSMUST00000197623 1813 ntBASIC9.03□□□□□ -0.96
Rfx1P48377 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rfx1P48377 AC159195.2-201ENSMUST00000223670 3757 ntBASIC9.02□□□□□ -0.96
Rfx1P48377 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Rfx1P48377 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Rfx1P48377 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.96
Rfx1P48377 AC122356.1-202ENSMUST00000227328 2758 ntBASIC9.02□□□□□ -0.96
Rfx1P48377 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rfx1P48377 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rfx1P48377 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm5583-201ENSMUST00000174328 1519 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Rfx1P48377 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 n-R5s51-201ENSMUST00000104473 123 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm15355-201ENSMUST00000118929 285 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm9516-201ENSMUST00000119684 424 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm13121-201ENSMUST00000120637 632 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rfx1P48377 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC9.02□□□□□ -0.97
Rfx1P48377 Mir3078-201ENSMUST00000175231 87 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm29041-201ENSMUST00000189199 380 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm28864-201ENSMUST00000189251 644 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm3142-201ENSMUST00000190107 414 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm28437-201ENSMUST00000190277 783 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm43104-201ENSMUST00000197234 311 ntBASIC9.02□□□□□ -0.97
Rfx1P48377 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC9.02□□□□□ -0.97
Rfx1P48377 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms