Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
HttP42859 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
HttP42859 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Gm24230-201ENSMUST00000104313 129 ntBASIC7.31□□□□□ -1.24
HttP42859 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.31□□□□□ -1.24
HttP42859 Gm6472-201ENSMUST00000178147 651 ntBASIC7.31□□□□□ -1.24
HttP42859 Gm18995-201ENSMUST00000202981 520 ntBASIC7.31□□□□□ -1.24
HttP42859 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.31□□□□□ -1.24
HttP42859 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC7.31□□□□□ -1.24
HttP42859 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.31□□□□□ -1.24
HttP42859 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HttP42859 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
HttP42859 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
HttP42859 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.3□□□□□ -1.24
HttP42859 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC7.3□□□□□ -1.24
HttP42859 Gm36993-201ENSMUST00000192983 2980 ntBASIC7.3□□□□□ -1.24
HttP42859 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Gm25917-201ENSMUST00000104267 130 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm15715-201ENSMUST00000118032 283 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.3□□□□□ -1.24
HttP42859 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Gm43354-201ENSMUST00000196862 346 ntBASIC7.3□□□□□ -1.24
HttP42859 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.3□□□□□ -1.24
HttP42859 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm25244-201ENSMUST00000178089 132 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm29596-201ENSMUST00000185710 385 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm29519-201ENSMUST00000186994 398 ntBASIC7.3□□□□□ -1.24
HttP42859 Mir6994-201ENSMUST00000198985 73 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm36501-201ENSMUST00000221857 745 ntBASIC7.3□□□□□ -1.24
HttP42859 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
HttP42859 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
HttP42859 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.3□□□□□ -1.24
HttP42859 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
HttP42859 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
HttP42859 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.3□□□□□ -1.24
HttP42859 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
HttP42859 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
HttP42859 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
HttP42859 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.3□□□□□ -1.24
HttP42859 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Gm22420-201ENSMUST00000178795 126 ntBASIC7.3□□□□□ -1.24
HttP42859 Gm28017-201ENSMUST00000183434 126 ntBASIC7.3□□□□□ -1.24
HttP42859 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HttP42859 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.3□□□□□ -1.24
HttP42859 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.3□□□□□ -1.24
HttP42859 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
HttP42859 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.29□□□□□ -1.24
HttP42859 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.29□□□□□ -1.24
HttP42859 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.29□□□□□ -1.24
HttP42859 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
HttP42859 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.29□□□□□ -1.24
HttP42859 AC093043.2-201ENSMUST00000228616 2017 ntBASIC7.29□□□□□ -1.24
HttP42859 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC7.29□□□□□ -1.24
HttP42859 Gm28581-201ENSMUST00000186086 2177 ntBASIC7.29□□□□□ -1.24
HttP42859 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HttP42859 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC7.29□□□□□ -1.24
HttP42859 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.29□□□□□ -1.24
HttP42859 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.29□□□□□ -1.24
HttP42859 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HttP42859 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Gm37956-201ENSMUST00000195208 2010 ntBASIC7.29□□□□□ -1.24
HttP42859 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 AC105958.1-201ENSMUST00000214783 2144 ntBASIC7.29□□□□□ -1.24
HttP42859 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
HttP42859 Gm44007-201ENSMUST00000203845 2189 ntBASIC7.29□□□□□ -1.24
HttP42859 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HttP42859 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms