Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC9.42□□□□□ -0.9
Col18a1P39061 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Gm37328-201ENSMUST00000193191 640 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Gm5324-201ENSMUST00000208115 476 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 AC163684.1-201ENSMUST00000223766 927 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Col18a1P39061 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Gm26474-201ENSMUST00000116762 122 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Gm15616-201ENSMUST00000118662 375 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Gm28266-201ENSMUST00000191410 439 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC9.42□□□□□ -0.9
Col18a1P39061 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Col18a1P39061 AL669819.1-201ENSMUST00000225143 330 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 Gm22865-201ENSMUST00000083949 214 ntBASIC9.42□□□□□ -0.9
Col18a1P39061 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Nmnat2-201ENSMUST00000043313 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Col18a1P39061 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col18a1P39061 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC9.41□□□□□ -0.9
Col18a1P39061 Gm15366-201ENSMUST00000118433 1019 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 Gm12630-201ENSMUST00000121575 784 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 Gm11581-201ENSMUST00000122024 763 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 Gm22275-201ENSMUST00000122470 310 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC9.41□□□□□ -0.9
Col18a1P39061 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC9.41□□□□□ -0.9
Col18a1P39061 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Col18a1P39061 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC9.41□□□□□ -0.9
Col18a1P39061 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC9.41□□□□□ -0.9
Col18a1P39061 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col18a1P39061 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Gm43555-201ENSMUST00000196588 310 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 Gm44795-201ENSMUST00000205496 319 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC9.41□□□□□ -0.9
Col18a1P39061 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC9.41□□□□□ -0.9
Col18a1P39061 AL591207.2-201ENSMUST00000222991 337 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Tbc1d24-214ENSMUST00000201960 4305 ntTSL 5 BASIC9.41□□□□□ -0.9
Col18a1P39061 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col18a1P39061 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Col18a1P39061 Gm42820-201ENSMUST00000200084 3063 ntBASIC9.41□□□□□ -0.9
Col18a1P39061 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Mir669o-201ENSMUST00000103898 96 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Gm8424-201ENSMUST00000117716 988 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Gm14529-201ENSMUST00000117894 406 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Gm16511-201ENSMUST00000120019 564 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms