Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm14513-201ENSMUST00000117403 123 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Apc-ps1-201ENSMUST00000119356 470 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.13□□□□□ -1.11
Col2a1P28481 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Mir6989-201ENSMUST00000184812 65 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm7019-201ENSMUST00000194122 369 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm42752-201ENSMUST00000198394 1106 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Gm5928-201ENSMUST00000221839 466 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col2a1P28481 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Mir106b-201ENSMUST00000083580 82 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col2a1P28481 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC8.12□□□□□ -1.11
Col2a1P28481 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col2a1P28481 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm25877-201ENSMUST00000104326 129 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.12□□□□□ -1.11
Col2a1P28481 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm25574-201ENSMUST00000175245 249 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Gm9285-201ENSMUST00000177691 697 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm44896-201ENSMUST00000206190 772 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.12□□□□□ -1.11
Col2a1P28481 AC079644.2-201ENSMUST00000220581 322 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm2754-201ENSMUST00000223383 589 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 AC165260.6-205ENSMUST00000224190 9762 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col2a1P28481 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.12□□□□□ -1.11
Col2a1P28481 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col2a1P28481 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm14976-201ENSMUST00000117055 1394 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.11□□□□□ -1.11
Col2a1P28481 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col2a1P28481 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms