Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm14201-201ENSMUST00000117627 289 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm15576-201ENSMUST00000117806 583 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm13463-201ENSMUST00000119020 233 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm13545-201ENSMUST00000119044 482 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm11945-201ENSMUST00000120551 476 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm22795-201ENSMUST00000157233 118 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm4308-201ENSMUST00000179735 914 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm28416-201ENSMUST00000188334 292 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Mir484-201ENSMUST00000093566 67 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Chmp6P0C0A3 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Mir503-201ENSMUST00000102168 71 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm14279-201ENSMUST00000117142 332 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm10243-201ENSMUST00000117571 333 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm14380-201ENSMUST00000122298 431 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Mir1981-201ENSMUST00000157934 82 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms