Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm37325-201ENSMUST00000194971 694 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Gm4585-201ENSMUST00000207218 452 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa9P09631 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 Gm31711-201ENSMUST00000220687 196 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 AV026068-229ENSMUST00000225516 595 ntBASIC7.35□□□□□ -1.23
Hoxa9P09631 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hoxa9P09631 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.35□□□□□ -1.23
Hoxa9P09631 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa9P09631 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa9P09631 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hoxa9P09631 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa9P09631 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm25760-201ENSMUST00000103989 132 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm14531-201ENSMUST00000120845 285 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm14787-201ENSMUST00000121236 388 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.34□□□□□ -1.23
Hoxa9P09631 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm28070-201ENSMUST00000191502 445 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm38030-201ENSMUST00000192376 475 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm5708-201ENSMUST00000196289 886 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm44971-201ENSMUST00000206192 337 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm44508-201ENSMUST00000206943 1157 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm18562-201ENSMUST00000209949 915 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm2089-201ENSMUST00000218294 479 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.34□□□□□ -1.23
Hoxa9P09631 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.34□□□□□ -1.23
Hoxa9P09631 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa9P09631 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa9P09631 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Hoxa9P09631 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Hoxa9P09631 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hoxa9P09631 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.33□□□□□ -1.24
Hoxa9P09631 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Hoxa9P09631 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hoxa9P09631 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hoxa9P09631 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Hoxa9P09631 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.33□□□□□ -1.24
Hoxa9P09631 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Hoxa9P09631 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hoxa9P09631 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.33□□□□□ -1.24
Hoxa9P09631 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Hoxa9P09631 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Hoxa9P09631 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Hoxa9P09631 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.33□□□□□ -1.24
Hoxa9P09631 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hoxa9P09631 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Hoxa9P09631 Gm25311-201ENSMUST00000104136 132 ntBASIC7.33□□□□□ -1.24
Hoxa9P09631 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms