Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14682-201ENSMUST00000117977 524 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm12717-201ENSMUST00000118427 983 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm11843-201ENSMUST00000118984 425 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm13198-201ENSMUST00000119322 826 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm15060-201ENSMUST00000119550 948 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm8757-201ENSMUST00000119660 372 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm7916-201ENSMUST00000120325 456 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm11295-201ENSMUST00000121379 803 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm11760-201ENSMUST00000122355 796 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm16235-201ENSMUST00000146132 342 ntTSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm8813-201ENSMUST00000155930 595 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm24438-201ENSMUST00000157893 115 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Mir1264-201ENSMUST00000175381 86 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm26993-201ENSMUST00000182766 789 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm6717-201ENSMUST00000185549 838 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm37155-201ENSMUST00000192152 406 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm18900-201ENSMUST00000193218 584 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm17893-201ENSMUST00000203017 770 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm38405-201ENSMUST00000207760 1140 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm45295-201ENSMUST00000210393 1046 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.76□□□□□ -1.33
Hoxd3P09027 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Fxyd2-201ENSMUST00000041005 632 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 5330417H12Rik-201ENSMUST00000060348 1191 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hoxd3P09027 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Mrgprx1-201ENSMUST00000094390 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm28410-201ENSMUST00000188113 1450 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm43336-201ENSMUST00000200487 4504 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Cdh16-213ENSMUST00000212882 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gskip-201ENSMUST00000051934 2720 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm37957-201ENSMUST00000192182 2303 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 1700112J16Rik-201ENSMUST00000181631 2215 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm12002-202ENSMUST00000153794 1803 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm8138-201ENSMUST00000169473 1404 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Nat10-201ENSMUST00000028608 3879 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 4933427I04Rik-201ENSMUST00000097896 2183 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Chrna5-201ENSMUST00000093844 1877 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Rhpn2-202ENSMUST00000085556 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm15927-203ENSMUST00000148641 1788 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm10101-202ENSMUST00000181311 2919 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Zfp640-202ENSMUST00000224116 1562 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Ctnna1-201ENSMUST00000042345 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 4632432E15Rik-201ENSMUST00000191824 2439 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm38272-201ENSMUST00000194431 2400 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm7444-201ENSMUST00000217455 2428 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm10683-201ENSMUST00000211556 1374 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Crxos-202ENSMUST00000125993 2246 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm14777-201ENSMUST00000116306 176 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm15320-201ENSMUST00000118085 364 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Mageb7-ps-201ENSMUST00000118274 1041 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm15388-201ENSMUST00000121578 726 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm12499-201ENSMUST00000121961 546 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm22199-201ENSMUST00000122660 126 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm23382-201ENSMUST00000157678 104 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm22101-201ENSMUST00000157928 103 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm25767-201ENSMUST00000158572 124 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm23823-201ENSMUST00000158740 124 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms