Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC5.2□□□□□ -1.58
TcraP01849 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Gm23358-201ENSMUST00000103887 110 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm22271-201ENSMUST00000104035 128 ntBASIC5.2□□□□□ -1.58
TcraP01849 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Gm13458-201ENSMUST00000118239 367 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm13683-201ENSMUST00000119497 1076 ntBASIC5.2□□□□□ -1.58
TcraP01849 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm11933-201ENSMUST00000121550 375 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm6067-201ENSMUST00000121648 491 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm8865-201ENSMUST00000125697 430 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC5.2□□□□□ -1.58
TcraP01849 Gm23740-201ENSMUST00000157385 100 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Gm6100-201ENSMUST00000180253 403 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm28645-201ENSMUST00000185859 564 ntBASIC5.2□□□□□ -1.58
TcraP01849 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC5.2□□□□□ -1.58
TcraP01849 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC5.2□□□□□ -1.58
TcraP01849 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm43725-201ENSMUST00000200122 369 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm43008-201ENSMUST00000202346 286 ntBASIC5.2□□□□□ -1.58
TcraP01849 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC5.2□□□□□ -1.58
TcraP01849 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC5.2□□□□□ -1.58
TcraP01849 Gm2089-201ENSMUST00000218294 479 ntBASIC5.2□□□□□ -1.58
TcraP01849 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.2□□□□□ -1.58
TcraP01849 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TcraP01849 AC163660.3-202ENSMUST00000224917 464 ntBASIC5.2□□□□□ -1.58
TcraP01849 AC116487.1-201ENSMUST00000227033 339 ntBASIC5.2□□□□□ -1.58
TcraP01849 Gm7086-202ENSMUST00000228849 506 ntBASIC5.2□□□□□ -1.58
TcraP01849 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC5.2□□□□□ -1.58
TcraP01849 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
TcraP01849 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TcraP01849 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TcraP01849 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.2□□□□□ -1.58
TcraP01849 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Gm37043-201ENSMUST00000194609 3105 ntBASIC5.2□□□□□ -1.58
TcraP01849 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.2□□□□□ -1.58
TcraP01849 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.2□□□□□ -1.58
TcraP01849 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Gm38288-201ENSMUST00000195330 1320 ntBASIC5.2□□□□□ -1.58
TcraP01849 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TcraP01849 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.19□□□□□ -1.58
TcraP01849 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
TcraP01849 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TcraP01849 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.19□□□□□ -1.58
TcraP01849 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.19□□□□□ -1.58
TcraP01849 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.19□□□□□ -1.58
TcraP01849 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 Gm42820-201ENSMUST00000200084 3063 ntBASIC5.19□□□□□ -1.58
TcraP01849 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.19□□□□□ -1.58
TcraP01849 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TcraP01849 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TcraP01849 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
TcraP01849 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TcraP01849 Gm8802-201ENSMUST00000118633 740 ntBASIC5.19□□□□□ -1.58
TcraP01849 Gm11997-201ENSMUST00000118697 313 ntBASIC5.19□□□□□ -1.58
TcraP01849 Gm11907-201ENSMUST00000118918 1007 ntBASIC5.19□□□□□ -1.58
TcraP01849 Gm12034-201ENSMUST00000119032 399 ntBASIC5.19□□□□□ -1.58
TcraP01849 Gm5255-201ENSMUST00000120125 642 ntBASIC5.19□□□□□ -1.58
TcraP01849 Gm12920-201ENSMUST00000121818 1186 ntBASIC5.19□□□□□ -1.58
TcraP01849 Mir1907-201ENSMUST00000122509 90 ntBASIC5.19□□□□□ -1.58
TcraP01849 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC5.19□□□□□ -1.58
TcraP01849 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC5.19□□□□□ -1.58
TcraP01849 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC5.19□□□□□ -1.58
TcraP01849 Defa-ps3-201ENSMUST00000142705 282 ntBASIC5.19□□□□□ -1.58
TcraP01849 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms