Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 A1cf-203ENSMUST00000224400 1204 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 AC154528.3-201ENSMUST00000228011 679 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm44553-201ENSMUST00000206316 2037 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm7265-201ENSMUST00000192735 3502 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm16409-201ENSMUST00000100510 747 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm14864-201ENSMUST00000116164 1087 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm9143-201ENSMUST00000120745 745 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm8164-201ENSMUST00000169120 1192 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm22408-201ENSMUST00000174925 65 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Mir6912-201ENSMUST00000184456 70 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm5147-201ENSMUST00000185999 794 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm5541-201ENSMUST00000193248 1113 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm37322-201ENSMUST00000193409 337 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm30708-201ENSMUST00000202183 312 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm5154-201ENSMUST00000203971 399 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC5.79□□□□□ -1.48
Hmgb3O54879 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC5.79□□□□□ -1.48
Hmgb3O54879 AC154785.1-201ENSMUST00000223280 572 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm19154-201ENSMUST00000223330 940 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 AC124715.2-201ENSMUST00000226762 617 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 AC154649.2-201ENSMUST00000228189 808 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm38262-201ENSMUST00000194760 1382 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 Gm4806-201ENSMUST00000222704 1690 ntBASIC5.79□□□□□ -1.48
Hmgb3O54879 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Hmgb3O54879 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm43168-201ENSMUST00000201039 1612 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms