Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.66□□□□□ -1.5
Gm12887B1AVM1 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Gm12887B1AVM1 AC103672.2-201ENSMUST00000228146 1687 ntBASIC5.66□□□□□ -1.5
Gm12887B1AVM1 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Gm12887B1AVM1 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Mir678-201ENSMUST00000102114 84 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm5915-201ENSMUST00000116136 454 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm14550-201ENSMUST00000117918 407 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm11933-201ENSMUST00000121550 375 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 n-R5s76-201ENSMUST00000122700 113 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm4252-201ENSMUST00000174823 313 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm7678-201ENSMUST00000181879 943 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm17828-201ENSMUST00000183380 799 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm27595-201ENSMUST00000184579 112 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm45506-201ENSMUST00000211620 280 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 AC123867.1-201ENSMUST00000224990 816 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 AC154806.1-202ENSMUST00000227949 885 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Gm6807-201ENSMUST00000077435 888 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Mir135b-201ENSMUST00000083501 97 ntBASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
Gm12887B1AVM1 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Gm9585-201ENSMUST00000219681 1404 ntBASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Gm12887B1AVM1 Gm44797-201ENSMUST00000208780 1837 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm42595-201ENSMUST00000196771 1607 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm23358-201ENSMUST00000103887 110 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm9095-201ENSMUST00000117607 881 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm13521-201ENSMUST00000118922 866 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm11320-201ENSMUST00000119434 463 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm11850-201ENSMUST00000119679 479 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm15007-201ENSMUST00000119982 710 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm13940-201ENSMUST00000121023 301 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm16248-201ENSMUST00000124238 243 ntBASIC5.64□□□□□ -1.51
Gm12887B1AVM1 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.64□□□□□ -1.51
Gm12887B1AVM1 Gm23031-201ENSMUST00000157998 119 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms