Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm22707-201ENSMUST00000103834 110 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm7418-201ENSMUST00000162120 801 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm26455-201ENSMUST00000175300 92 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm26179-201ENSMUST00000177723 132 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm27972-201ENSMUST00000184720 137 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm24826-202ENSMUST00000197298 216 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm29759-201ENSMUST00000205860 327 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm19056-201ENSMUST00000218220 797 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Upk3aQ9JKX8 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC6.9□□□□□ -1.31
Upk3aQ9JKX8 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm24228-201ENSMUST00000158829 129 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Mir199b-201ENSMUST00000175066 110 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm18875-201ENSMUST00000188563 882 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm38373-201ENSMUST00000192042 288 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm37669-201ENSMUST00000192184 820 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm44982-201ENSMUST00000208795 471 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Upk3aQ9JKX8 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms