Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm43237-201ENSMUST00000196835 1044 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Vmn1r41-202ENSMUST00000226337 888 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 AC154323.2-201ENSMUST00000226557 1151 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 AC122937.2-201ENSMUST00000228258 1051 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm24150-201ENSMUST00000082759 104 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm43917-201ENSMUST00000191984 2360 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm43790-201ENSMUST00000202694 2013 ntBASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ube3bQ9ES34 Gm37150-201ENSMUST00000193900 2754 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm44883-201ENSMUST00000206063 3258 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm13196-201ENSMUST00000118297 379 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm11907-201ENSMUST00000118918 1007 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm22224-201ENSMUST00000157357 93 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm24883-201ENSMUST00000158391 281 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm8167-201ENSMUST00000183320 958 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm38231-201ENSMUST00000192030 347 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm38329-201ENSMUST00000193473 427 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm19617-201ENSMUST00000202977 308 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm44277-201ENSMUST00000205128 649 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm44721-201ENSMUST00000206978 472 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm18378-201ENSMUST00000216245 628 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 AC122901.2-201ENSMUST00000216926 285 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 AC122360.1-201ENSMUST00000217737 624 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 AC163667.2-201ENSMUST00000223769 791 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gnrh1-202ENSMUST00000223929 428 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 AC124397.1-201ENSMUST00000224296 653 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm7099-201ENSMUST00000080066 554 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 AC159188.2-201ENSMUST00000224103 1301 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 AC124746.1-201ENSMUST00000227535 1300 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm42656-201ENSMUST00000201506 2305 ntBASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ube3bQ9ES34 Gm44437-201ENSMUST00000203832 4038 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms