Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm22604-201ENSMUST00000157604 311 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm25180-201ENSMUST00000157746 115 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm27001-201ENSMUST00000182252 936 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm37225-201ENSMUST00000193423 325 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm43203-201ENSMUST00000200130 558 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm9419-201ENSMUST00000200672 567 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm5791-201ENSMUST00000220840 489 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm37783-201ENSMUST00000192025 1856 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm14279-201ENSMUST00000117142 332 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm10243-201ENSMUST00000117571 333 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm15778-201ENSMUST00000118469 608 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm8715-201ENSMUST00000162728 531 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm20690-201ENSMUST00000177341 315 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm18848-201ENSMUST00000182069 792 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm27373-201ENSMUST00000184017 184 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm45198-201ENSMUST00000206796 591 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm18469-201ENSMUST00000208850 439 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm10247-201ENSMUST00000090395 333 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdc40Q9DC48 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdc40Q9DC48 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms