Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc47Q9D024 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ccdc47Q9D024 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ccdc47Q9D024 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm23834-201ENSMUST00000104436 129 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm7091-201ENSMUST00000116438 586 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm7129-201ENSMUST00000117402 997 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm13988-201ENSMUST00000119363 288 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm13525-201ENSMUST00000120607 478 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm23222-201ENSMUST00000158117 76 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm7426-201ENSMUST00000179046 404 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm3121-201ENSMUST00000187086 406 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm42734-201ENSMUST00000201656 878 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Mif-ps7-201ENSMUST00000223357 327 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 AC107453.3-201ENSMUST00000228205 639 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.46□□□□□ -1.06
Ccdc47Q9D024 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm15362-201ENSMUST00000121459 388 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm38022-201ENSMUST00000191762 403 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm7341-201ENSMUST00000192183 926 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm38079-201ENSMUST00000195603 154 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm43212-201ENSMUST00000198208 394 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Ccdc47Q9D024 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ccdc47Q9D024 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms