Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm5915-201ENSMUST00000116136 454 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm6382-201ENSMUST00000118873 942 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm8865-201ENSMUST00000125697 430 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm17149-201ENSMUST00000164712 375 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm4252-201ENSMUST00000174823 313 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm43905-201ENSMUST00000204516 204 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm18207-201ENSMUST00000205486 526 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm18378-201ENSMUST00000216245 628 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm36933-201ENSMUST00000194945 3071 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm6729-201ENSMUST00000165173 1452 ntBASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup35Q8R4R6 Gm43187-201ENSMUST00000200652 2397 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm13878-201ENSMUST00000117986 577 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm15481-201ENSMUST00000120264 539 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm13940-201ENSMUST00000121023 301 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm9670-201ENSMUST00000121201 540 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm20587-201ENSMUST00000186367 1186 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm28677-202ENSMUST00000186904 615 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm37152-201ENSMUST00000193369 1175 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 AC132590.1-201ENSMUST00000224374 1164 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm26575-201ENSMUST00000181714 2232 ntBASIC5.75□□□□□ -1.49
Nup35Q8R4R6 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms