Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm12601-201ENSMUST00000118994 846 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm13463-201ENSMUST00000119020 233 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm16027-201ENSMUST00000161618 758 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm4308-201ENSMUST00000179735 914 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm44566-201ENSMUST00000207638 304 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm4796-201ENSMUST00000219802 624 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 AC093022.3-201ENSMUST00000226569 1926 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Gm43961-201ENSMUST00000203289 1872 ntBASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Sf3a1Q8K4Z5 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm6558-201ENSMUST00000191934 1973 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm14279-201ENSMUST00000117142 332 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm10243-201ENSMUST00000117571 333 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm23027-201ENSMUST00000158771 158 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm45782-201ENSMUST00000212670 366 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm6581-201ENSMUST00000214545 260 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm10247-201ENSMUST00000090395 333 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.86□□□□□ -0.99
Sf3a1Q8K4Z5 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Gm15586-201ENSMUST00000121218 528 ntBASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Gm26413-201ENSMUST00000196783 126 ntBASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Gm44471-201ENSMUST00000197963 100 ntBASIC8.85□□□□□ -0.99
Sf3a1Q8K4Z5 Gm43905-201ENSMUST00000204516 204 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms