Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Mir503-201ENSMUST00000102168 71 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm26016-201ENSMUST00000104403 129 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm17170-201ENSMUST00000112785 316 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm29354-201ENSMUST00000187613 696 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm36935-201ENSMUST00000192526 292 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm37017-201ENSMUST00000195266 747 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm38840-201ENSMUST00000204716 843 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm45610-201ENSMUST00000209227 784 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 n-R5s156-201ENSMUST00000083377 105 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim9Q8C7M3 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm18719-201ENSMUST00000196696 1413 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm8872-201ENSMUST00000197475 1341 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm11257-201ENSMUST00000121313 315 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm25505-201ENSMUST00000157220 246 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm23027-201ENSMUST00000158771 158 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm17047-201ENSMUST00000167709 430 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm7502-201ENSMUST00000169235 733 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm19840-201ENSMUST00000169624 882 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm18501-201ENSMUST00000185363 664 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm34272-201ENSMUST00000208886 253 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm19217-201ENSMUST00000218238 328 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.9□□□□□ -1.14
Trim9Q8C7M3 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim9Q8C7M3 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim9Q8C7M3 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim9Q8C7M3 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim9Q8C7M3 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim9Q8C7M3 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim9Q8C7M3 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim9Q8C7M3 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Gm42648-201ENSMUST00000200774 2505 ntBASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim9Q8C7M3 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms