Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm27617-201ENSMUST00000184321 168 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm29492-201ENSMUST00000187124 457 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm18349-201ENSMUST00000187440 904 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm38329-201ENSMUST00000193473 427 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm17530-201ENSMUST00000194336 472 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm43848-201ENSMUST00000198060 1247 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm18537-201ENSMUST00000205709 989 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 AC138284.3-201ENSMUST00000217345 4663 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm6906-201ENSMUST00000218014 569 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 AC130823.2-201ENSMUST00000226169 290 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Mir24-2-201ENSMUST00000083607 107 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm17076-201ENSMUST00000165185 1401 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm43917-201ENSMUST00000191984 2360 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm5387-201ENSMUST00000119776 857 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm14186-201ENSMUST00000120804 137 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm7212-201ENSMUST00000120817 348 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm11954-201ENSMUST00000121403 349 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm12864-201ENSMUST00000122207 1006 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm19480-201ENSMUST00000185547 667 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 AC137678.1-201ENSMUST00000198370 118 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm42472-201ENSMUST00000201626 859 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm8035-201ENSMUST00000204625 687 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm7769-201ENSMUST00000212900 933 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Zfp939-201ENSMUST00000061201 2131 ntBASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim47Q8C0E3 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 AC165260.6-204ENSMUST00000225571 3508 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms