Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm23604-201ENSMUST00000104311 132 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm24981-201ENSMUST00000104459 132 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm15994-201ENSMUST00000118029 402 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm13325-201ENSMUST00000118746 806 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm15746-201ENSMUST00000120684 1027 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm23999-201ENSMUST00000158057 104 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm25604-201ENSMUST00000158359 133 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm16228-201ENSMUST00000162286 809 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm17020-201ENSMUST00000172274 274 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm3611-201ENSMUST00000173687 877 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm26898-201ENSMUST00000181678 384 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm26937-201ENSMUST00000182628 1008 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm27342-201ENSMUST00000183530 109 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm27428-201ENSMUST00000184289 110 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm37658-201ENSMUST00000192672 315 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm43560-201ENSMUST00000198100 773 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm44911-201ENSMUST00000208436 1062 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC9.9□□□□□ -0.82
Trim35Q8C006 AC132384.2-201ENSMUST00000218018 526 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 AC160112.1-201ENSMUST00000219139 714 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 CU025215.1-201ENSMUST00000222986 603 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 CT030260.1-201ENSMUST00000223243 442 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm8730-201ENSMUST00000076373 954 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm21286-201ENSMUST00000098035 545 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trim35Q8C006 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm20953-201ENSMUST00000216399 2614 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm26562-201ENSMUST00000181113 2010 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim35Q8C006 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Trim35Q8C006 Hdac7-204ENSMUST00000116409 4113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim35Q8C006 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim35Q8C006 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trim35Q8C006 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Trim35Q8C006 Tmem29-212ENSMUST00000173996 1433 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Trim35Q8C006 Gm4880-201ENSMUST00000207645 1696 ntBASIC9.9□□□□□ -0.83
Trim35Q8C006 Gm37668-201ENSMUST00000193745 1944 ntBASIC9.9□□□□□ -0.83
Trim35Q8C006 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.9□□□□□ -0.83
Trim35Q8C006 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Apobec3-201ENSMUST00000023054 1842 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Nuggc-202ENSMUST00000150897 2745 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Acot11-201ENSMUST00000065253 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm9166-201ENSMUST00000120293 561 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm11736-201ENSMUST00000121468 505 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm25898-201ENSMUST00000158303 106 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Fth-ps2-201ENSMUST00000168364 516 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm14357-201ENSMUST00000178352 868 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm6967-201ENSMUST00000182599 1007 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Mir6366-201ENSMUST00000184472 82 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim35Q8C006 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Trim35Q8C006 AC124613.1-201ENSMUST00000198711 88 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm7652-201ENSMUST00000200440 1151 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm30055-201ENSMUST00000203175 803 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm7380-201ENSMUST00000211599 466 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm18696-201ENSMUST00000220103 274 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 CT485612.4-201ENSMUST00000223405 250 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms