Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Foxc1Q61572 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Foxc1Q61572 Gm17743-201ENSMUST00000198545 1675 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm12187-201ENSMUST00000119584 1375 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Extl2-201ENSMUST00000029575 3000 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 AC136986.2-201ENSMUST00000220880 2944 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Lin7a-201ENSMUST00000020057 2363 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm4915-201ENSMUST00000121909 1569 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Pidd1-201ENSMUST00000026580 3357 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Foxc1Q61572 n-R5s2-201ENSMUST00000101968 119 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 n-R5s194-201ENSMUST00000104719 119 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm12452-201ENSMUST00000117128 331 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm11386-201ENSMUST00000117761 347 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm15033-201ENSMUST00000118188 673 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Tma7-ps-201ENSMUST00000118448 195 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm11199-201ENSMUST00000118691 507 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm11533-201ENSMUST00000120287 477 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm5287-201ENSMUST00000120666 598 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm22101-201ENSMUST00000157928 103 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm25434-201ENSMUST00000158278 167 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm24939-201ENSMUST00000158325 137 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm26173-201ENSMUST00000158416 136 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 n-R5s112-201ENSMUST00000178208 119 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 n-R5s125-201ENSMUST00000179377 119 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 n-R5s120-201ENSMUST00000180000 119 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm22347-201ENSMUST00000180276 132 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Zfp87-203ENSMUST00000181573 382 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm29490-201ENSMUST00000190923 342 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm19843-201ENSMUST00000198144 772 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm42861-201ENSMUST00000199596 634 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Zim2-202ENSMUST00000203572 1158 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm44266-201ENSMUST00000205235 500 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm45228-201ENSMUST00000206585 352 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Psenen-202ENSMUST00000207031 316 ntTSL 3 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm44892-201ENSMUST00000208595 488 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 1190028D05Rik-201ENSMUST00000210977 763 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC132384.5-201ENSMUST00000218562 226 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC141642.1-201ENSMUST00000220598 229 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC105950.2-201ENSMUST00000220938 368 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC158531.1-201ENSMUST00000224617 457 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC156561.1-201ENSMUST00000224774 233 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC144949.1-201ENSMUST00000225358 422 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC123665.2-201ENSMUST00000226636 432 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm14267-205ENSMUST00000226697 1299 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 CT025535.1-202ENSMUST00000228291 241 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 AC151907.1-201ENSMUST00000228812 412 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm24254-201ENSMUST00000083702 104 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 n-R5s33-201ENSMUST00000093713 119 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Tkt-201ENSMUST00000022529 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Ldah-201ENSMUST00000037383 2737 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm14139-201ENSMUST00000109926 1728 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Limk2-203ENSMUST00000101642 3693 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Ppp1r12a-201ENSMUST00000070663 3403 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 9330121K16Rik-201ENSMUST00000211464 3886 ntBASIC6.58□□□□□ -1.36
Foxc1Q61572 Zbbx-202ENSMUST00000107775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Foxc1Q61572 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms