Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm38277-201ENSMUST00000195172 1367 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm15422-201ENSMUST00000117453 541 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm11198-201ENSMUST00000119771 974 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm3810-201ENSMUST00000122413 476 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm22655-201ENSMUST00000174949 96 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm37285-201ENSMUST00000194465 1139 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm43382-201ENSMUST00000198954 838 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm4083-201ENSMUST00000207158 451 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 AW822073-201ENSMUST00000075305 555 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm36401-201ENSMUST00000194255 2028 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.84□□□□□ -1
Shank3Q4ACU6 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Shank3Q4ACU6 AC138284.3-201ENSMUST00000217345 4663 ntBASIC8.84□□□□□ -1
Shank3Q4ACU6 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8.84□□□□□ -1
Shank3Q4ACU6 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.84□□□□□ -1
Shank3Q4ACU6 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.83□□□□□ -1
Shank3Q4ACU6 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm8177-201ENSMUST00000181591 1336 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm16057-201ENSMUST00000120811 759 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm43233-201ENSMUST00000200491 616 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC8.83□□□□□ -1
Shank3Q4ACU6 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm35619-201ENSMUST00000222548 600 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Shank3Q4ACU6 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Shank3Q4ACU6 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm8192-201ENSMUST00000182196 958 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Gm8930-201ENSMUST00000201693 768 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.83□□□□□ -1
Shank3Q4ACU6 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Shank3Q4ACU6 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Shank3Q4ACU6 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm8250-201ENSMUST00000117398 774 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Sms-ps-201ENSMUST00000121773 1101 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm22275-201ENSMUST00000122470 310 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm27005-201ENSMUST00000182783 921 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm5345-201ENSMUST00000183076 1014 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm44360-201ENSMUST00000200081 82 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm7554-201ENSMUST00000202282 574 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.82□□□□□ -1
Shank3Q4ACU6 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.82□□□□□ -1
Shank3Q4ACU6 Gm22865-201ENSMUST00000083949 214 ntBASIC8.82□□□□□ -1
Shank3Q4ACU6 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.82□□□□□ -1
Shank3Q4ACU6 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Shank3Q4ACU6 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.82□□□□□ -1
Shank3Q4ACU6 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Shank3Q4ACU6 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms