Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Klrb1b-201ENSMUST00000032472 2228 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm25848-201ENSMUST00000116790 144 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm6491-201ENSMUST00000118273 990 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm15709-201ENSMUST00000118354 213 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm12987-201ENSMUST00000118562 489 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm13325-201ENSMUST00000118746 806 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm5387-201ENSMUST00000119776 857 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC7.2□□□□□ -1.26
SgcbP82349 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC7.2□□□□□ -1.26
SgcbP82349 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm25770-201ENSMUST00000158566 115 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm23022-201ENSMUST00000158768 180 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm24899-201ENSMUST00000158892 73 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm27288-201ENSMUST00000184215 80 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm27597-201ENSMUST00000184365 80 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Mir6912-201ENSMUST00000184456 70 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm27506-201ENSMUST00000184558 80 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gm27529-201ENSMUST00000184975 80 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm27907-201ENSMUST00000185101 80 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm19224-201ENSMUST00000190477 793 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gm37771-201ENSMUST00000193121 265 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm6579-201ENSMUST00000208224 865 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gm5654-201ENSMUST00000217787 475 ntBASIC7.2□□□□□ -1.26
SgcbP82349 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC7.2□□□□□ -1.26
SgcbP82349 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.2□□□□□ -1.26
SgcbP82349 CT009556.2-201ENSMUST00000227980 1123 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Gm37332-201ENSMUST00000195853 2844 ntBASIC7.2□□□□□ -1.26
SgcbP82349 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SgcbP82349 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
SgcbP82349 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SgcbP82349 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms