Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
CiitaP79621 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CiitaP79621 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC7.88□□□□□ -1.15
CiitaP79621 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Gm26417-201ENSMUST00000104274 135 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm13313-201ENSMUST00000118938 1084 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm12710-201ENSMUST00000119011 216 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.87□□□□□ -1.15
CiitaP79621 Gm13900-201ENSMUST00000119402 498 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm12104-201ENSMUST00000120359 979 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm12903-201ENSMUST00000121015 544 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm12535-201ENSMUST00000121025 484 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm16357-201ENSMUST00000144091 474 ntBASIC7.87□□□□□ -1.15
CiitaP79621 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.87□□□□□ -1.15
CiitaP79621 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.87□□□□□ -1.15
CiitaP79621 Gm43926-201ENSMUST00000203978 430 ntBASIC7.87□□□□□ -1.15
CiitaP79621 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CiitaP79621 Gm24411-201ENSMUST00000083428 131 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CiitaP79621 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.87□□□□□ -1.15
CiitaP79621 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CiitaP79621 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CiitaP79621 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.86□□□□□ -1.15
CiitaP79621 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.86□□□□□ -1.15
CiitaP79621 Gm13352-201ENSMUST00000117515 262 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Gm7599-201ENSMUST00000121453 796 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Gm13221-201ENSMUST00000121712 430 ntBASIC7.86□□□□□ -1.15
CiitaP79621 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC7.86□□□□□ -1.15
CiitaP79621 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CiitaP79621 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Gm24369-201ENSMUST00000175387 96 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC7.86□□□□□ -1.15
CiitaP79621 Gm21182-201ENSMUST00000178899 794 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Mir378d-201ENSMUST00000184232 110 ntBASIC7.86□□□□□ -1.15
CiitaP79621 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC7.86□□□□□ -1.15
CiitaP79621 Gm28070-201ENSMUST00000191502 445 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.86□□□□□ -1.15
CiitaP79621 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.86□□□□□ -1.15
CiitaP79621 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Gm35638-201ENSMUST00000220724 652 ntBASIC7.86□□□□□ -1.15
CiitaP79621 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CiitaP79621 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 188.9 ms