Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm23484-201ENSMUST00000104178 131 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm23485-201ENSMUST00000104181 155 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm6490-201ENSMUST00000111862 461 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm15160-201ENSMUST00000120553 907 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm16027-201ENSMUST00000161618 758 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm7991-201ENSMUST00000168668 591 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm6536-201ENSMUST00000171180 615 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.16□□□□□ -1.26
Fdft1P53798 Mir6409-201ENSMUST00000184957 92 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm6610-201ENSMUST00000186324 358 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.16□□□□□ -1.26
Fdft1P53798 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Fdft1P53798 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm6807-201ENSMUST00000077435 888 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Fdft1P53798 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Fdft1P53798 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.16□□□□□ -1.26
Fdft1P53798 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.16□□□□□ -1.26
Fdft1P53798 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Fdft1P53798 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Fdft1P53798 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Fdft1P53798 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Fdft1P53798 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Fdft1P53798 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Fdft1P53798 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Fdft1P53798 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Fdft1P53798 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Fdft1P53798 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Fdft1P53798 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm14480-201ENSMUST00000118521 433 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Gm12219-201ENSMUST00000119198 443 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Gm11850-201ENSMUST00000119679 479 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm15644-201ENSMUST00000121764 387 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm23079-201ENSMUST00000157847 117 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm20813-201ENSMUST00000186646 705 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm21923-201ENSMUST00000188455 696 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Gm9497-201ENSMUST00000199908 538 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Gm18484-201ENSMUST00000204389 991 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC7.15□□□□□ -1.26
Fdft1P53798 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 AC157650.2-201ENSMUST00000224666 328 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Fdft1P53798 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Fdft1P53798 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.15□□□□□ -1.26
Fdft1P53798 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Fdft1P53798 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms