Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox3P53784 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox3P53784 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox3P53784 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7□□□□□ -1.29
Sox3P53784 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox3P53784 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
Sox3P53784 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Sox3P53784 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7□□□□□ -1.29
Sox3P53784 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Sox3P53784 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Sox3P53784 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7□□□□□ -1.29
Sox3P53784 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
Sox3P53784 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Sox3P53784 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.99□□□□□ -1.29
Sox3P53784 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Gm12939-201ENSMUST00000117303 165 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm12104-201ENSMUST00000120359 979 ntBASIC6.99□□□□□ -1.29
Sox3P53784 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Gm9027-201ENSMUST00000165914 661 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Gm25617-201ENSMUST00000179548 133 ntBASIC6.99□□□□□ -1.29
Sox3P53784 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Gm18952-201ENSMUST00000194471 846 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm25617-202ENSMUST00000198387 132 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.99□□□□□ -1.29
Sox3P53784 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.99□□□□□ -1.29
Sox3P53784 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm46317-201ENSMUST00000221103 393 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Sox3P53784 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Gm15109-201ENSMUST00000133085 2026 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.99□□□□□ -1.29
Sox3P53784 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Sox3P53784 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.99□□□□□ -1.29
Sox3P53784 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Sox3P53784 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.98□□□□□ -1.29
Sox3P53784 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm8428-201ENSMUST00000159919 1784 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Sox3P53784 Gm23437-201ENSMUST00000104036 127 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm22953-201ENSMUST00000116724 101 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm11609-201ENSMUST00000121926 793 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.98□□□□□ -1.29
Sox3P53784 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Gm23663-201ENSMUST00000158045 80 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms