Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Pramel-201ENSMUST00000118979 1383 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm23323-201ENSMUST00000104471 133 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm15481-201ENSMUST00000120264 539 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm7212-201ENSMUST00000120817 348 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm23426-201ENSMUST00000122483 318 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm7281-201ENSMUST00000160010 543 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm26929-201ENSMUST00000182703 753 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm43546-201ENSMUST00000196721 943 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm4525-201ENSMUST00000198831 254 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm43708-201ENSMUST00000198857 961 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm42713-201ENSMUST00000202709 945 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm45136-201ENSMUST00000205793 943 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.03□□□□□ -1.12
Sox1P53783 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC8.03□□□□□ -1.12
Sox1P53783 Gm18892-201ENSMUST00000217628 881 ntBASIC8.03□□□□□ -1.12
Sox1P53783 AC144783.1-201ENSMUST00000219103 960 ntBASIC8.03□□□□□ -1.12
Sox1P53783 AC156952.1-201ENSMUST00000220361 793 ntBASIC8.03□□□□□ -1.12
Sox1P53783 AC107757.1-201ENSMUST00000226780 357 ntBASIC8.03□□□□□ -1.12
Sox1P53783 AC130547.1-201ENSMUST00000228079 1047 ntBASIC8.03□□□□□ -1.12
Sox1P53783 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC8.03□□□□□ -1.12
Sox1P53783 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Sox1P53783 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Sox1P53783 Gm22575-201ENSMUST00000082981 110 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Mir365-2-201ENSMUST00000083555 112 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm5446-201ENSMUST00000091762 784 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm4149-201ENSMUST00000099371 276 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Gm38012-201ENSMUST00000193022 3029 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Ctse-202ENSMUST00000112411 1837 ntTSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Stn1-207ENSMUST00000182808 1618 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Eci2-213ENSMUST00000178421 1414 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.03□□□□□ -1.12
Sox1P53783 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.03□□□□□ -1.12
Sox1P53783 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC8.03□□□□□ -1.12
Sox1P53783 Sp100-202ENSMUST00000066427 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Sox1P53783 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Sox1P53783 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Sox1P53783 Panx3-201ENSMUST00000011262 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Sox1P53783 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.02□□□□□ -1.13
Sox1P53783 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC8.02□□□□□ -1.13
Sox1P53783 Gm9435-201ENSMUST00000120379 877 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm15194-201ENSMUST00000120453 434 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm12983-201ENSMUST00000120974 310 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm11341-201ENSMUST00000122316 447 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.02□□□□□ -1.13
Sox1P53783 Gm16300-201ENSMUST00000160031 1279 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm17655-201ENSMUST00000167969 255 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm4202-201ENSMUST00000169025 733 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm27030-201ENSMUST00000182551 464 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm27861-201ENSMUST00000183920 214 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm29369-201ENSMUST00000190674 615 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm37177-201ENSMUST00000193768 417 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.02□□□□□ -1.13
Sox1P53783 Gm43147-201ENSMUST00000196944 542 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm7166-201ENSMUST00000199715 303 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm43806-201ENSMUST00000201766 469 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm18689-201ENSMUST00000203969 902 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 Gm44091-201ENSMUST00000205212 649 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC8.02□□□□□ -1.13
Sox1P53783 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC8.02□□□□□ -1.13
Sox1P53783 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 AC069561.2-201ENSMUST00000217596 420 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC8.02□□□□□ -1.13
Sox1P53783 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.02□□□□□ -1.13
Sox1P53783 AC164295.1-201ENSMUST00000224861 186 ntBASIC8.02□□□□□ -1.13
Sox1P53783 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.02□□□□□ -1.13
Sox1P53783 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms