Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm11558-201ENSMUST00000118454 459 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm13742-201ENSMUST00000118805 457 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm14053-201ENSMUST00000121662 470 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm12634-201ENSMUST00000122157 992 ntBASIC6.76□□□□□ -1.33
Sox6P40645 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.76□□□□□ -1.33
Sox6P40645 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm23079-201ENSMUST00000157847 117 ntBASIC6.76□□□□□ -1.33
Sox6P40645 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.76□□□□□ -1.33
Sox6P40645 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm20797-201ENSMUST00000177894 383 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm5445-201ENSMUST00000180224 480 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm25947-201ENSMUST00000180343 110 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox6P40645 Gm27542-201ENSMUST00000184184 256 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm6610-201ENSMUST00000186324 358 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Gm44471-201ENSMUST00000197963 100 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox6P40645 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox6P40645 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm6767-201ENSMUST00000118650 1381 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Gm20731-201ENSMUST00000193462 2288 ntBASIC6.76□□□□□ -1.33
Sox6P40645 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Sox6P40645 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.76□□□□□ -1.33
Sox6P40645 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox6P40645 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sox6P40645 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox6P40645 Gm23485-201ENSMUST00000104181 155 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm15047-201ENSMUST00000118891 454 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm12593-201ENSMUST00000120981 743 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm8046-201ENSMUST00000172151 616 ntBASIC6.75□□□□□ -1.33
Sox6P40645 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.75□□□□□ -1.33
Sox6P40645 Gm9423-201ENSMUST00000183173 997 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm18349-201ENSMUST00000187440 904 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm29355-201ENSMUST00000188178 697 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm28953-201ENSMUST00000188336 697 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm20788-201ENSMUST00000190538 697 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.75□□□□□ -1.33
Sox6P40645 Gm37395-201ENSMUST00000194721 697 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC6.75□□□□□ -1.33
Sox6P40645 Gm18995-201ENSMUST00000202981 520 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm18765-201ENSMUST00000203166 660 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Klra13-ps-203ENSMUST00000204367 850 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.75□□□□□ -1.33
Sox6P40645 Gm9240-201ENSMUST00000206527 742 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm45782-201ENSMUST00000212670 366 ntBASIC6.75□□□□□ -1.33
Sox6P40645 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox6P40645 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox6P40645 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sox6P40645 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sox6P40645 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms