Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
Chmp6P0C0A3 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Chmp6P0C0A3 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Chmp6P0C0A3 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Klf5-202ENSMUST00000226784 2852 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm15778-201ENSMUST00000118469 608 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm11371-201ENSMUST00000120294 385 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm5135-201ENSMUST00000121100 573 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm22262-201ENSMUST00000158713 86 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm7481-201ENSMUST00000182020 995 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm37270-201ENSMUST00000194277 330 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm4796-201ENSMUST00000219802 624 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Chmp6P0C0A3 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm5752-201ENSMUST00000117771 594 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm12710-201ENSMUST00000119011 216 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm11850-201ENSMUST00000119679 479 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm5255-201ENSMUST00000120125 642 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm12459-201ENSMUST00000120659 356 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm22025-201ENSMUST00000122734 302 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm22882-201ENSMUST00000157749 124 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm23164-201ENSMUST00000175084 111 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Mir3078-201ENSMUST00000175231 87 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm26959-201ENSMUST00000182376 978 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm38079-201ENSMUST00000195603 154 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 Gm7285-201ENSMUST00000198801 580 ntBASIC7.82□□□□□ -1.16
Chmp6P0C0A3 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms