Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm3654-201ENSMUST00000173038 909 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm6931-202ENSMUST00000183137 1009 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm27927-201ENSMUST00000183791 126 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm8392-201ENSMUST00000185647 835 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm28645-201ENSMUST00000185859 564 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm7499-201ENSMUST00000210423 813 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm18729-201ENSMUST00000217230 621 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 AC124686.1-201ENSMUST00000225546 522 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 AC140209.1-204ENSMUST00000226736 739 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 AC140406.2-201ENSMUST00000227539 481 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Ackr1-201ENSMUST00000038227 1153 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Olfr90-201ENSMUST00000070808 1046 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Snora65-201ENSMUST00000083190 130 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm11346-203ENSMUST00000135889 2832 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Ubxn8-201ENSMUST00000095349 2808 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 St3gal6-201ENSMUST00000114357 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Pramel-201ENSMUST00000118979 1383 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm35934-201ENSMUST00000213002 2494 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gapdhs-201ENSMUST00000074758 1368 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm37198-201ENSMUST00000195593 2110 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Spata17-205ENSMUST00000183819 1552 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Pgk2-201ENSMUST00000033585 1592 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Slc14a1-202ENSMUST00000160292 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Zic3-203ENSMUST00000088631 2980 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Serping1-202ENSMUST00000111641 1665 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm13535-201ENSMUST00000118714 1884 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm10538-201ENSMUST00000189499 1877 ntTSL 2 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Hoxd3P09027 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Immt-201ENSMUST00000064062 2728 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Kprp-201ENSMUST00000072363 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm8173-201ENSMUST00000186797 1977 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Zcchc12-203ENSMUST00000115257 2051 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Cops2-201ENSMUST00000028635 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Ces1e-201ENSMUST00000034173 2073 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm11756-201ENSMUST00000107310 1312 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Zfp873-204ENSMUST00000210325 2360 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm44627-201ENSMUST00000206739 1531 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm40603-202ENSMUST00000219975 1642 ntTSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 CT009550.4-202ENSMUST00000227369 3076 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Zmiz2-203ENSMUST00000109785 3542 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Hoxd3P09027 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Ighv1-67-201ENSMUST00000103538 294 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm24335-201ENSMUST00000104211 132 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm16082-201ENSMUST00000115992 377 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm22072-201ENSMUST00000116850 121 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm15422-201ENSMUST00000117453 541 ntBASIC6.76□□□□□ -1.33
Hoxd3P09027 Gm14094-201ENSMUST00000117717 610 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms