Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 AC124196.1-201ENSMUST00000225970 1032 ntBASIC5.22□□□□□ -1.57
TcraP01849 AC172989.1-201ENSMUST00000226387 513 ntBASIC5.22□□□□□ -1.57
TcraP01849 AC107452.2-201ENSMUST00000228415 363 ntBASIC5.22□□□□□ -1.57
TcraP01849 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TcraP01849 Olfr120-201ENSMUST00000077498 993 ntBASIC5.22□□□□□ -1.57
TcraP01849 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
TcraP01849 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC5.22□□□□□ -1.57
TcraP01849 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.22□□□□□ -1.57
TcraP01849 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.22□□□□□ -1.57
TcraP01849 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TcraP01849 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
TcraP01849 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TcraP01849 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TcraP01849 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
TcraP01849 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
TcraP01849 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TcraP01849 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TcraP01849 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
TcraP01849 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
TcraP01849 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
TcraP01849 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Mir705-201ENSMUST00000102058 82 ntBASIC5.21□□□□□ -1.58
TcraP01849 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TcraP01849 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TcraP01849 Gm24472-201ENSMUST00000104484 132 ntBASIC5.21□□□□□ -1.58
TcraP01849 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC5.21□□□□□ -1.58
TcraP01849 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC5.21□□□□□ -1.58
TcraP01849 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm13573-201ENSMUST00000116410 631 ntBASIC5.21□□□□□ -1.58
TcraP01849 Gm13229-201ENSMUST00000118238 340 ntBASIC5.21□□□□□ -1.58
TcraP01849 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC5.21□□□□□ -1.58
TcraP01849 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.21□□□□□ -1.58
TcraP01849 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm22424-201ENSMUST00000158527 87 ntBASIC5.21□□□□□ -1.58
TcraP01849 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Gm17097-201ENSMUST00000166414 714 ntBASIC5.21□□□□□ -1.58
TcraP01849 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Gm5205-201ENSMUST00000182253 1003 ntBASIC5.21□□□□□ -1.58
TcraP01849 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.21□□□□□ -1.58
TcraP01849 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC5.21□□□□□ -1.58
TcraP01849 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC5.21□□□□□ -1.58
TcraP01849 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 AC122305.2-201ENSMUST00000215148 834 ntBASIC5.21□□□□□ -1.58
TcraP01849 A1cf-203ENSMUST00000224400 1204 ntBASIC5.21□□□□□ -1.58
TcraP01849 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TcraP01849 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TcraP01849 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TcraP01849 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TcraP01849 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 AC111010.1-203ENSMUST00000227287 1548 ntBASIC5.21□□□□□ -1.58
TcraP01849 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 Gm37968-201ENSMUST00000195131 3201 ntBASIC5.21□□□□□ -1.58
TcraP01849 Gm37163-201ENSMUST00000195439 1690 ntBASIC5.21□□□□□ -1.58
TcraP01849 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.21□□□□□ -1.58
TcraP01849 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC5.21□□□□□ -1.58
TcraP01849 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TcraP01849 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.21□□□□□ -1.58
TcraP01849 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TcraP01849 Gm14035-201ENSMUST00000117596 1475 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms