Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm13700-201ENSMUST00000118624 1128 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm12875-201ENSMUST00000118745 344 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Fau-ps2-201ENSMUST00000119333 371 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Trav8-2-201ENSMUST00000130122 337 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm10086-201ENSMUST00000136334 354 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm24039-201ENSMUST00000157878 132 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm7211-201ENSMUST00000172692 1118 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm3611-201ENSMUST00000173687 877 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm38840-201ENSMUST00000204716 843 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm5080-201ENSMUST00000220341 743 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm18504-201ENSMUST00000220917 929 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm40853-201ENSMUST00000221342 582 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 AL645704.1-201ENSMUST00000221642 604 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm9255-201ENSMUST00000223225 581 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 AC164978.2-201ENSMUST00000226645 857 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm9761-201ENSMUST00000075650 492 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm17541-201ENSMUST00000080062 525 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm6767-201ENSMUST00000118650 1381 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Mir744-201ENSMUST00000103261 100 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm24334-201ENSMUST00000104210 128 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 n-R5s72-201ENSMUST00000104518 119 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm14745-201ENSMUST00000118480 1096 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm13683-201ENSMUST00000119497 1076 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm13323-201ENSMUST00000120245 1151 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm5931-201ENSMUST00000121308 477 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 AA623943-201ENSMUST00000121794 354 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC5.8□□□□□ -1.48
Hmgb3O54879 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm16027-201ENSMUST00000161618 758 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.8□□□□□ -1.48
Hmgb3O54879 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm18970-201ENSMUST00000186040 938 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm6394-201ENSMUST00000197077 477 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC5.8□□□□□ -1.48
Hmgb3O54879 Gm5374-202ENSMUST00000222910 314 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 AC126554.3-201ENSMUST00000223131 493 ntBASIC5.8□□□□□ -1.48
Hmgb3O54879 CT030170.6-202ENSMUST00000223186 544 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms