Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.07□□□□□ -1.44
Usf3B2RUQ2 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Usf3B2RUQ2 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm11928-201ENSMUST00000119323 437 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Mir1983-201ENSMUST00000157523 132 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Mir8094-201ENSMUST00000183361 117 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm43116-201ENSMUST00000199789 195 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm42883-201ENSMUST00000202594 222 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm14728-201ENSMUST00000122196 492 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm28885-201ENSMUST00000185615 563 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Usf3B2RUQ2 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.05□□□□□ -1.44
Usf3B2RUQ2 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.05□□□□□ -1.44
Usf3B2RUQ2 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm22927-201ENSMUST00000104268 131 ntBASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm14772-201ENSMUST00000116562 514 ntBASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm13414-201ENSMUST00000117516 727 ntBASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm13622-201ENSMUST00000120658 433 ntBASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.05□□□□□ -1.44
Usf3B2RUQ2 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Usf3B2RUQ2 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms