Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm18995-201ENSMUST00000202981 520 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm25083-201ENSMUST00000102319 92 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm24284-201ENSMUST00000104240 142 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm16221-201ENSMUST00000117331 393 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm14480-201ENSMUST00000118521 433 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm12518-201ENSMUST00000122075 779 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm7991-201ENSMUST00000168668 591 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm6536-201ENSMUST00000171180 615 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm17973-201ENSMUST00000174509 520 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm24923-201ENSMUST00000178201 88 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm3121-201ENSMUST00000187086 406 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 AC125539.1-201ENSMUST00000227423 622 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim3Q9R1R2 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm8624-201ENSMUST00000118083 432 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm5759-201ENSMUST00000119203 811 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms