Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm16523-202ENSMUST00000203640 4750 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm25546-201ENSMUST00000103977 132 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm14787-201ENSMUST00000121236 388 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm10913-201ENSMUST00000133732 463 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm28114-201ENSMUST00000187232 379 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm44590-201ENSMUST00000206161 391 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm44566-201ENSMUST00000207638 304 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm6667-201ENSMUST00000217169 564 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm12601-201ENSMUST00000118994 846 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm16027-201ENSMUST00000161618 758 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm5611-201ENSMUST00000164523 852 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm18469-201ENSMUST00000208850 439 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Chmp2aQ9DB34 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 343.2 ms