Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm13521-201ENSMUST00000118922 866 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm13680-201ENSMUST00000119790 793 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm15362-201ENSMUST00000121459 388 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm22847-201ENSMUST00000157707 105 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm23762-201ENSMUST00000158348 106 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm27458-201ENSMUST00000185108 121 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm19175-201ENSMUST00000199895 916 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm44245-201ENSMUST00000204304 232 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Smc1aQ9CU62 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm13744-201ENSMUST00000118953 850 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm11726-201ENSMUST00000121028 424 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm24893-201ENSMUST00000122745 369 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm25180-201ENSMUST00000157746 115 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm29143-201ENSMUST00000189462 201 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm18765-201ENSMUST00000203166 660 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm24613-201ENSMUST00000083266 130 ntBASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Smc1aQ9CU62 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Smc1aQ9CU62 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Smc1aQ9CU62 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Smc1aQ9CU62 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Smc1aQ9CU62 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Smc1aQ9CU62 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm25614-201ENSMUST00000104013 133 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm25281-201ENSMUST00000157270 104 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm23077-201ENSMUST00000157854 116 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm25692-201ENSMUST00000175444 125 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm21182-201ENSMUST00000178899 794 ntBASIC8.14□□□□□ -1.11
Smc1aQ9CU62 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Smc1aQ9CU62 Gm27542-201ENSMUST00000184184 256 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms