Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm13674-201ENSMUST00000121276 823 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm12005-201ENSMUST00000121451 379 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm16260-201ENSMUST00000155141 304 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm22224-201ENSMUST00000157357 93 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm26407-201ENSMUST00000158504 307 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm37631-201ENSMUST00000192275 364 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm38164-201ENSMUST00000192810 330 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm43013-201ENSMUST00000198216 247 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm9110-201ENSMUST00000219035 617 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm10029-201ENSMUST00000089635 330 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim8Q99PJ2 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm13552-201ENSMUST00000118837 417 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm13915-201ENSMUST00000119314 931 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm8312-201ENSMUST00000119380 618 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm12611-201ENSMUST00000119452 1037 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm14414-201ENSMUST00000120833 573 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm24994-201ENSMUST00000157414 121 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm17867-201ENSMUST00000188981 391 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm6750-201ENSMUST00000189273 268 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm29462-201ENSMUST00000191458 288 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm28060-201ENSMUST00000191554 189 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm37966-201ENSMUST00000193122 326 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm4410-201ENSMUST00000199349 686 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm30196-201ENSMUST00000208957 160 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm32842-201ENSMUST00000212653 738 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 AC171206.1-201ENSMUST00000213612 213 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm7588-201ENSMUST00000216866 571 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 AC131743.3-201ENSMUST00000222099 662 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 AC154562.1-201ENSMUST00000226140 966 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim8Q99PJ2 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms