Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm25276-201ENSMUST00000104300 124 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm12593-201ENSMUST00000120981 743 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm11188-201ENSMUST00000122382 388 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm23007-201ENSMUST00000158951 177 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm26455-201ENSMUST00000175300 92 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm27026-201ENSMUST00000183003 892 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Ighv5-5-201ENSMUST00000193826 329 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm5305-201ENSMUST00000204010 746 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm44722-201ENSMUST00000206473 436 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Malat1-201ENSMUST00000172812 6983 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm8916-201ENSMUST00000119732 949 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm13877-201ENSMUST00000120614 417 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm2976-201ENSMUST00000160362 513 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm18848-201ENSMUST00000182069 792 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm44112-201ENSMUST00000204787 372 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm19324-201ENSMUST00000213229 1169 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm2089-201ENSMUST00000218294 479 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm24411-201ENSMUST00000083428 131 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm25189-201ENSMUST00000083911 164 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.51□□□□□ -1.05
Nup88Q8CEC0 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms