Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm19815-201ENSMUST00000175818 335 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm7200-201ENSMUST00000188426 1163 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm18562-201ENSMUST00000209949 915 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm45506-201ENSMUST00000211620 280 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm37541-201ENSMUST00000192464 2315 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm22660-201ENSMUST00000104193 130 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm4835-201ENSMUST00000155839 972 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm8046-201ENSMUST00000172151 616 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm18699-201ENSMUST00000190713 243 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm37392-201ENSMUST00000192098 516 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm37225-201ENSMUST00000193423 325 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm26413-202ENSMUST00000198972 127 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 CT030184.2-201ENSMUST00000223064 263 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm43330-201ENSMUST00000199706 2153 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.11□□□□□ -1.11
Ccdc38Q8CDN8 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm11810-201ENSMUST00000118311 333 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm14202-201ENSMUST00000120121 311 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm13221-201ENSMUST00000121712 430 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm24883-201ENSMUST00000158391 281 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm21181-201ENSMUST00000186249 330 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm38337-201ENSMUST00000193986 599 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm23604-202ENSMUST00000198428 137 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.1□□□□□ -1.11
Ccdc38Q8CDN8 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms