Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm18752-201ENSMUST00000192876 608 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm10416-201ENSMUST00000197379 645 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm45042-201ENSMUST00000207377 211 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm5528-201ENSMUST00000076314 480 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Gm232-201ENSMUST00000216549 2559 ntBASIC8.67□□□□□ -1.02
Atg4aQ8C9S8 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm15054-201ENSMUST00000117393 281 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm12879-201ENSMUST00000120003 1182 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm7420-201ENSMUST00000162836 842 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Mir5100-201ENSMUST00000174993 64 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm29369-201ENSMUST00000190674 615 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm37689-201ENSMUST00000193139 275 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm43147-201ENSMUST00000196944 542 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm24826-202ENSMUST00000197298 216 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.66□□□□□ -1.02
Atg4aQ8C9S8 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm12635-201ENSMUST00000117285 752 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm13486-201ENSMUST00000119910 282 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm16284-201ENSMUST00000140995 400 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm24286-201ENSMUST00000157632 128 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm42673-201ENSMUST00000202676 337 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Gm46424-201ENSMUST00000221567 168 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms